PokéBase - Pokémon Q&A
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The EVs will be wasted. Shedinja always has 1 HP, it will never gain any points from EVs in HP.

The only viable EV set for Shedinja is 252 Attack, 252 Speed.

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To expand on that, a Shedinja's EV training should really only focus on Atk, Spec Atk, and Speed. Use the EV-reducing berries on Shedinja to eliminate all those HP, Def, and Spec Def EVs so you have more room for useful EVs.
1 vote

Nothing shedinja is set with 1 hp it cant get anymore. thats like the only downfall with its ability. but you can use it one attack, speed, and sp. attack.

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